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96 packages found
JBrowse 2 code shared between web-app type products
Node program to run canvasXpress in the command line
JBrowse 2 code shared between products but not used by plugins
A general purpose module for parsing FASTA files
Parser for BAM and BAM index (bai) files
Read Tabix-indexed files, supports both .tbi and .csi indexes
JBrowse 2 text indexing for desktop
Chromosome visualization for the web
The 'pca-plot' package is a way to check seq data quality. It visualises the data conditionally in a 2D or 3D plot (dependent on the number of PCs selected), where each point represents a sample. The distance between the points is a measure of the similar
Volcano Plot is a React.js component powered by Highcharts, designed to visualise RNA sequencing data and identify statistically significant genes. It allows dynamic threshold adjustment for a comprehensive and interactive data analysis experience.
High performance streaming Variant Call Format (VCF) parser in pure JavaScript
read CRAM files with pure Javascript
Chromosomal region class used in GIVE, supporting some basic region operations
Chromosome visualization with D3.js
Program to run canvasXpress with node
Parser for BAM and BAM index (bai) files
Basic kaplan-meier methods
Components for displaying FHIR genomic reports complying to the FHIR Genomics Reporting Implementation Guide http://hl7.org/fhir/uv/genomics-reporting/.
Node program to run canvasXpress with react